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5: Cloning and Sequencing

Gene cloning, DNA sequencing methods, and RT-qPCR.

Calculating Fold Change from RT-qPCR Data

Click to show Calculating Fold Change from RT-qPCR Data example problem
  Untreated Cells Cells Treated with Experimental Drug
House Keeping Gene Gene of Interest House Keeping Gene Gene of Interest
Well 1 17.8 21.3 17.9 23.0
Well 2 17.8 21.0 16.6 22.7
Well 3 17.6 21.3 17.1 23.9
mean Ct 17.7 21.2 17.2 23.2
ΔCt    
ΔΔCt  

Given the data in the table above calculate the fold change (2|ΔΔCt|) value for the effect of the drug on the cells.
Note: answers need to be within 1% of the correct number to be correct.

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