5: Cloning and Sequencing
Gene cloning, DNA sequencing methods, and RT-qPCR.
Calculating Fold Change from RT-qPCR Data
Click to show Calculating Fold Change from RT-qPCR Data example problem
| Â | Untreated Cells | Cells Treated with Experimental Drug | ||
| House Keeping Gene | Gene of Interest | House Keeping Gene | Gene of Interest | |
| Well 1 | 17.8 | 21.3 | 17.9 | 23.0 |
| Well 2 | 17.8 | 21.0 | 16.6 | 22.7 |
| Well 3 | 17.6 | 21.3 | 17.1 | 23.9 |
| mean Ct | 17.7 | 21.2 | 17.2 | 23.2 |
| ΔCt | Â | Â | ||
| ΔΔCt | Â | |||
Given the data in the table above calculate the fold change (2|ΔΔCt|) value for the effect of the drug on the cells.
Note: answers need to be within 1% of the correct number to be correct.
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